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Image Analysis Services


Transform Images Into Insights

Tejada-Arranz et al., 2020.

Euro-BioImaging’s Image Data Analysis Services provide expert, personalized support for transforming complex imaging data into meaningful scientific insights. Our dedicated Bioimage Analysts across Europe collaborate closely with users to tailor analysis solutions—whether it involves basic image processing, advanced workflows, or machine learning techniques—empowering scientists to accelerate discovery and enhance the impact of their research.

Why Choose Our Service?

If you need help with image data

  • denoising
  • registration
  • segmentation
  • tracking

and other image analysis methods, then you can profit from our image analysis service. 

Photo from the first Workshop organized by the newly created DBI-INFRA Image Analysis Core Facility, about the open source software QuPath.

Through various Euro-BioImaging Nodes, you can:

  • Receive expert guidance for a range of image analysis needs applied to diverse biological and biomedical image datasets
  • Benefit from bespoke workflows and custom analysis tools developed to address specific scientific questions, incorporating state-of-the-art machine learning methods when applicable.
  • Access high-performance computing resources and specialized software to efficiently analyse and manage large and complex imaging datasets.

Did you know?

These services can be requested together with access to imaging instruments at a Node, or as a standalone analysis services for image data irrespective of where it was acquired.

Supporting open tools

In addition to personalized analysis support, our bioimage analysts contribute actively to open-source image analysis tools and libraries that serve both the Euro-BioImaging community and the broader scientific field.

Data open tools logos (BioImage Model Zoo, Elastix, FIJI, Galaxy, Ilastik, Mamut, Napari, Omero, TissuuMaps, Trackmate, XNAT)

How to access the Image Analysis Service

Step 1: Click on 'Technologies' tab on the Euro-BioImaging Access Portal.
Step 2: Find 'Image Data and Image Analysis Services' as part of our technology portfolio.
Step 3: Choose the desired service and proceed to submit a proposal (requires log in).
If you don't know which Node to go to, we can help you find a suitable one. Please select 'No Node preference' for that.

Step 4: Euro-BioImaging will contact you on the next steps regarding your proposal.

Hear from users

Hear about the image analysis service from Users and Nodes in the User Forum on Image Data.

Hear from the Nodes that offer image analysis services

Some of our Nodes present their image analysis services and showcase their portfolio at the Image Data Community Days 2025.

Jean-Yves Tinevez from the Image Analysis Hub at the Institute Pasteur in Paris talks about why is bioimage analysis a rewarding career.

Image analysis news

Your questions answered

We have compiled an extensive list of questions and answers covering the Image Analysis service as well as all our other data services. You’ll find everything you need to get started right here. If your question isn’t answered, please don’t hesitate to contact us.